Protein ZmMYBR27
ZmMYBR27 is a protein in the MYB-related family.
Information
TF Name: ZmMYBR27
Species: Maize
TF Family: MYB-related
Gene Name(Synonym): SMH6
Uniprot ID: C0HIA3
Subgenome: 2

Protein ZmMYBR27

ZmMYBR27 is a protein in the MYB-related family.

Overview of domains present in v5 transcripts
PF00249PF00538PF13921
Zm00001eb218710_T003
Zm00001eb218710_T001
Zm00001eb218710_T002
Zm00001eb218710_T004
Zm00001eb218710_T005

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d013694DAPseq no logo sequence fimo position
Zm00001d013694DAPseq no logo sequence fimo position
Zm00001d013694ChIPseq no logo sequence fimo position
Zm00001d013694PChIPseq no logo sequence fimo position

Interactions where ZmMYBR27 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMYBR27 is the target  
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There are 54 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb218710_T003 from maize genome v5

Amino Acid Sequence
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MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAE
EASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGKLIFG

MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAE
EASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGKLIFG

MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAE
EASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGKLIFG

MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAE
EASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGKLIFG

MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAE
EASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGKLIFG

MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAE
EASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGKLIFG

MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAE
EASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGKLIFG

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00249
PF13921
PF00538
Hover here to show all domains

Nucleotide Sequence
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GAGTTTCTTGTGCATTAAGATACTG...

GRMZM2G095239_T01 from maize genome v3

Amino Acid Sequence
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MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAE
EASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGKLVIALIHASLCYILPCFISYHI

Nucleotide Sequence
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TTCACGATTCAGCCTTGTGAACTAC...

GRMZM2G095239_T02 from maize genome v3


Related TFome: pUT3450

Amino Acid Sequence
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MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRSNIGHLVILITYYLQN

Nucleotide Sequence
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TTCACGATTCAGCCTTGTGAACTAC...

GRMZM2G095239_T03 from maize genome v3

Amino Acid Sequence
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MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAE
EASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGKLMA

Nucleotide Sequence
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TTCACGATTCAGCCTTGTGAACTAC...

Zm00001d013694_T001 from maize genome v4

Amino Acid Sequence
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MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAE
EASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGKLMA

Nucleotide Sequence
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TCGACATCTTCGCCCTCGAATCGAG...

Zm00001d013694_T002 from maize genome v4

Amino Acid Sequence
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MNVIVSTSSSRDKAKSALKRIRTIPKNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKN
LNEPTGSHRTTIANYIEEQYWPPSDFDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIW
SDDTKTLTRSQVDAELARMATMTAEEASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGK
LMA

Nucleotide Sequence
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ACGGTCCGCGCCGGCACTCTTCCCT...

Zm00001eb218710_T001 from maize genome v5

Amino Acid Sequence
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MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKELWL

Nucleotide Sequence
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GAGTTTCTTGTGCATTAAGATACTG...

Zm00001eb218710_T002 from maize genome v5

Amino Acid Sequence
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MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEQYWPPSDF
DHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAEE
ASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGKLMA

Nucleotide Sequence
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GAGTTTCTTGTGCATTAAGATACTG...

Zm00001eb218710_T004 from maize genome v5

Amino Acid Sequence
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MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKMA

Nucleotide Sequence
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TTCACGATTCAGCCTTGTGAACTAC...

Zm00001eb218710_T005 from maize genome v5

Amino Acid Sequence
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MGAPKQRWTSEEEAALRAGIARHGVGKWRTILKDPEFSSTLCYRSNVDLKDKWRNMNVIVSTSSSRDKAKSALKRIRTIP
KNNEHTMAITRVTSDIDDEIVDEKPIVSLPSEAKNTSSSKKSHRLDNIIMEAIKNLNEPTGSHRTTIANYIEEQYWPPSD
FDHLLSAKLKDLSTSGKLIKVNRKYRIAPSSPNSERRSPKMPLLEDVQREPVKIWSDDTKTLTRSQVDAELARMATMTAE
EASVAAARAVAEAEAIMAEAEAAAKEAEAAEAEAQAAQAFAEAAFLTLKNRNAGKLMA

Nucleotide Sequence
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TTCACGATTCAGCCTTGTGAACTAC...


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